BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012G10LP1|AL426420
(805 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig864 917 0.0
3x_Contig1354 566 e-161
>3x_Contig864
Length = 2808
Score = 917 bits (460), Expect = 0.0
Identities = 482/492 (97%)
Strand = Plus / Minus
Query: 314 accacacagaaatcacgggtttcgatatacttttcaattctttcaaaatactcaaagtta 373
||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 2779 accacacagaaatcacgggtttcgatatacttttcaagtctttccaaatactcaaagtta 2720
Query: 374 cgggtggkggtgttacaaatgcaacactgattccatcgatctcatctcgctttccgtagt 433
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2719 cgggtggtggtgttacaaatgcaacactgattccatcgatctcatctcgctttccgtagt 2660
Query: 434 tggctaatccatccgcaattgtggtctcgatggtcaaaagttgttgcttggcaaacctct 493
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2659 tggctaatccatccgcaattgtggtctcgatggtcaaaagttgttgcttggcaaacctct 2600
Query: 494 tcgagattgaatctacactgagatctaaagckcctcctttcggattcaccggaatcacag 553
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 2599 tcgagattgaatctacactgagatctaaagctcctcctttcggattcaccggaatcacag 2540
Query: 554 ataactcgtgttgtgcaaaccaatgcactatccggtttgcgaratgcatatcttggtaca 613
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2539 ataactcgtgttgtgcaaaccaatgcactatccggtttgcgaaatgcatatcttggtaca 2480
Query: 614 ctttcccacatacgaagtataacctcttaggaccgaaaaagtccttcaatgcctgtttca 673
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2479 ctttcccacatacgaagtataacctcttaggaccgaaaaagtccttcaatgcctgtttca 2420
Query: 674 ccatttccaaagcgtttctctctcttttttttatttttggctgctgcaacgartraatct 733
|||||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct: 2419 ccatttccaaagcgtttctctctcttttttttatttttggctgctgcaacgaagtgaact 2360
Query: 734 gttacactgtatccagtacttgaccatataaacaccttatcaaatgtaaacgaagatatg 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2359 gttacactgtatccagtacttgaccatataaacaccttatcaaatgtaaacgaagatatg 2300
Query: 794 tacctttcaaat 805
||||||||||||
Sbjct: 2299 tacctttcaaat 2288
>3x_Contig1354
Length = 7778
Score = 566 bits (284), Expect = e-161
Identities = 295/300 (98%)
Strand = Plus / Plus
Query: 2 ttcggaatattcgtttattatscgtatagtactccttgccattgggacgtttctggattt 61
||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 7479 ttcggaatattcgattaccatgcgtatagtactccttgccattgggacgtttctggattt 7538
Query: 62 gacgaatcgcaaatggctaaactggcagaatggtatcgattcttcgaatcgaaatatccc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7539 gacgaatcgcaaatggctaaactggcagaatggtatcgattcttcgaatcgaaatatccc 7598
Query: 122 tctgtcgggatggtcatattggaaactgatatagaggataaaattgtaacttakataaat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 7599 tctgtcgggatggtcatattggaaactgatatagaggataaaattgtaacttagataaat 7658
Query: 182 actataactcgctcttaacgtaatttgcgtgccctttgattagtatacaatcattgatga 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7659 actataactcgctcttaacgtaatttgcgtgccctttgattagtatacaatcattgatga 7718
Query: 242 ctctttcctcagggattttgagactttcgacagcgtagttaacacaatctagatcccagg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7719 ctctttcctcagggattttgagactttcgacagcgtagttaacacaatctagatcccagg 7778
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5680
Number of Sequences: 1807
Number of extensions: 5680
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 2
length of query: 805
length of database: 10,358,551
effective HSP length: 16
effective length of query: 789
effective length of database: 10,329,639
effective search space: 8150085171
effective search space used: 8150085171
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)